PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00002.1.g15790.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 276aa    MW: 29444.2 Da    PI: 7.7066
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00002.1.g15790.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like408.8e-132753228
                       G2-like  2 prlrWtpeLHerFveaveqLGGsekAt 28
                                  prlrWtp+LH++Fv+a+++LGG++++t
  Zjn_sc00002.1.g15790.1.am.mk 27 PRLRWTPDLHHCFVHAIHKLGGQDRTT 53
                                  8************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-102353IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MTMARRTAVA GKERNGGVRQ YNRSNVPRLR WTPDLHHCFV HAIHKLGGQD RTTMQGHHPA  60
VDQGHVHGGM ELRTDTPLQR DHERDAPSPS CHAPKPGKGP MLRSRLKRDF TPSGEGEDEI  120
GSTRPKGLLR GQGIWESDRS WSLYTALAAA GGYHSSMLAP LQMQAAAAMA MSMALPPPPH  180
AEVEPPACFR DHSFEMLATA PAHGVAGTTT NGLLQAVTTD APRKAQSPPP VDDGCSLSLS  240
LALVADTAGS SSGEEGSLLL WTTCSSGSRI SLDLSL
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2158206e-35AC215820.3 Oryza punctata clone OP__Ba0049E12, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012698081.16e-46PREDICTED: uncharacterized protein LOC101766248
TrEMBLK4AB707e-46K4AB70_SETIT; Uncharacterized protein
STRINGSi036127m2e-45(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76102950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.11e-12G2-like family protein